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Crystallin, gamma D

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(Redirected from CRYGD) Protein-coding gene in the species Homo sapiens
CRYGD
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

1H4A, 1HK0, 2G98, 2KFB, 2KLJ, 4GR7, 4JGF

Identifiers
AliasesCRYGD, CACA, CCA3, CCP, CRYG4, CTRCT4, PCC, cry-g-D, crystallin gamma D
External IDsOMIM: 123690; MGI: 88524; HomoloGene: 36213; GeneCards: CRYGD; OMA:CRYGD - orthologs
Gene location (Human)
Chromosome 2 (human)
Chr.Chromosome 2 (human)
Chromosome 2 (human)Genomic location for CRYGDGenomic location for CRYGD
Band2q33.3Start208,121,607 bp
End208,124,524 bp
Gene location (Mouse)
Chromosome 1 (mouse)
Chr.Chromosome 1 (mouse)
Chromosome 1 (mouse)Genomic location for CRYGDGenomic location for CRYGD
Band1 C2|1 32.8 cMStart65,101,031 bp
End65,102,611 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • testicle

  • gonad

  • ventricular zone

  • ganglionic eminence

  • lens

  • left ovary

  • Hypothalamus

  • substantia nigra

  • prefrontal cortex

  • Temporal Lobe
Top expressed in
  • epithelium of lens

  • conjunctival fornix

  • retinal pigment epithelium

  • occiput

  • ciliary body

  • occipital bone

  • iris

  • Meckel's cartilage

  • rib

  • sphenoid bone
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

1421

12967

Ensembl

ENSG00000118231
ENSG00000285434

ENSMUSG00000067299

UniProt

P07320

P04342

RefSeq (mRNA)

NM_006891

NM_007776

RefSeq (protein)

NP_008822

NP_031802

Location (UCSC)Chr 2: 208.12 – 208.12 MbChr 1: 65.1 – 65.1 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

Gamma-crystallin D is a protein that in humans is encoded by the CRYGD gene.

Crystallins are separated into two classes: taxon-specific, or enzyme, and ubiquitous. The latter class constitutes the major proteins of vertebrate eye lens and maintains the transparency and refractive index of the lens. Since lens central fiber cells lose their nuclei during development, these crystallins are made and then retained throughout life, making them extremely stable proteins. Mammalian lens crystallins are divided into alpha, beta, and gamma families; beta and gamma crystallins are also considered as a superfamily. Alpha and beta families are further divided into acidic and basic groups. Seven protein regions exist in crystallins: four homologous motifs, a connecting peptide, and N- and C-terminal extensions. Gamma-crystallins are a homogeneous group of highly symmetrical, monomeric proteins typically lacking connecting peptides and terminal extensions. They are differentially regulated after early development. Four gamma-crystallin genes (gamma-A through gamma-D) and three pseudogenes (gamma-E, gamma-F, gamma-G) are tandemly organized in a genomic segment as a gene cluster. Whether due to aging or mutations in specific genes, gamma-crystallins have been involved in cataract formation.

References

  1. ^ ENSG00000285434 GRCh38: Ensembl release 89: ENSG00000118231, ENSG00000285434Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000067299Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Entrez Gene: CRYGD crystallin, gamma D".

Further reading

PDB gallery
  • 1h4a: HUMAN GAMMA-D CRYSTALLIN R58H MUTANT STRUCTURE AT 1.15 A RESOLUTION 1h4a: HUMAN GAMMA-D CRYSTALLIN R58H MUTANT STRUCTURE AT 1.15 A RESOLUTION
  • 1hk0: HUMAN GAMMA-D CRYSTALLIN STRUCTURE AT 1.25 A RESOLUTION 1hk0: HUMAN GAMMA-D CRYSTALLIN STRUCTURE AT 1.25 A RESOLUTION
  • 2g98: human gamma-D-crystallin 2g98: human gamma-D-crystallin
Eye proteins
Opsin
(retinylidene protein)
visual
nonvisual
Crystallin
Other


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